And you guys all missed the reference to the original movie Dumb and Dumber...
It's a sad day indeed when GH regulars don't pick that up, especially fellow Topre'ers. What has the world come to? Come on guys, pull yourselves together!
Wow, I actually feel bad now. I can't believe I missed that reference. 
That you should my friend. Classic movie!
Sure enough, I found four domes with no springs under them. When I took this HHKB Pro 2 apart the first time, those four springs were on top of the domes. I thought it odd, but assumed they were on top for a reason. Now I'm thinking those domes didn't get their springs during assembly. That would've then come out in testing. But rather than peel the rubber off of the PCB, they just added the springs on top of the domes. Honestly, I never felt a difference in the actuation. But for a keyboard in this price range, I think they could have put forth a bit more effort. Still a great keyboard.
However, I like my RF 87Us better. Maybe it's the plate mounted switches. They just feel better built and nicer on which to type. And as a coder with three displays constantly using keyboard shortcuts to move windows between displays, I like the dedicated arrow keys. I still use the HHKB regularly and like the form factor for regular stuff, just not for coding.
Thanks again and Merry Christmas!