you know, this is quite funny. when i first tried the thick imsto pbt caps on my filco, i had the same problem. for some weird reason, when i used a masking tape on the stabilizer inserts, it doesn't happen anymore.
i can't say why, because i don't see under the caps, but my guess is that the masking tape is keeping the stab insert from going all the way in by a fraction of a milimeter and that creates the necessary clearance for the stabilizer wire.
anyhow, it's quite ok now on both shift keys and enter key. never had a problem on the backspace.
this is using mx blacks and reds. haven't tested it on tactile switches yet...
edit: this goes for cherry profile caps, i don't think you would have a problem with OEM or DCS at all. on the other hand, the only PBT OEM caps i know are vortex.